BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H06LP1|AL426282
(733 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1094 1420 0.0
>3x_Contig1094
Length = 4859
Score = 1420 bits (715), Expect = 0.0
Identities = 726/729 (99%), Gaps = 1/729 (0%)
Strand = Plus / Minus
Query: 3 atmtgttgtgttttatgtcttcaacaaactagtgtcaagtgggaaaacaacagacgaact 62
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3575 atctgttgtgttttatgtcttcaacaaactagtgtctagtgggaaaacaacagacgaact 3516
Query: 63 gtttgccaagaacttgagggagatcataattgtacttttcgaagaccagcatcaatgctg 122
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3515 gtttgccaagaacttgagggagatcataattgtacttttcgaag-ccagcatcaatgctg 3457
Query: 123 cccagattcagagcgtgatattgactagactatactatgctggtagaatgatgaatcgat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 cccagattcagagcgtgatattgactagactatactatgctggtagaatgatgaatcgat 3397
Query: 183 cttttttggactgccactacatattcaactcaagtgtagtcctcatattagcagccttca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 cttttttggactgccactacatattcaactcaagtgtagtcctcatattagcagccttca 3337
Query: 243 tacagtcgcttcccaattacctgcttaatgaaagcagtgatgttaatattttgttcagcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 tacagtcgcttcccaattacctgcttaatgaaagcagtgatgttaatattttgttcagcc 3277
Query: 303 gggttcaagataatcttgacgttttacaacgtatttctcagtacaatgtggcaggattca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3276 gggttcaagataatcttgacgttttacaacgtatttctcagtacaatgtggcaggattca 3217
Query: 363 atttcaataagcaactaactgaactaatagaacttattagctgcgaacaagttcagaaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3216 atttcaataagcaactaactgaactaatagaacttattagctgcgaacaagttcagaaaa 3157
Query: 423 tgtacaacggtaatatgcaaagacattctctcaacgcgactagcgcaatagaaactttta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 tgtacaacggtaatatgcaaagacattctctcaacgcgactagcgcaatagaaactttta 3097
Query: 483 caattgctttaaagtcaccatctgttgaggaaaagaacaattcatatgagggccaggagc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 caattgctttaaagtcaccatctgttgaggaaaagaacaattcatatgagggccaggagc 3037
Query: 543 tattaagccatatggatttatcagaagttctagaattgatgacatcaagcaacggctatc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 tattaagccatatggatttatcagaagttctagaattgatgacatcaagcaacggctatc 2977
Query: 603 caaactctggaacttctcactttgatgaggatgatttcctcaagttttcaaacttcatgc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2976 caaactctggaacttctcactttgatgaggatgatttcctcaagttttcaaacttcatgc 2917
Query: 663 tgtgaatacttttataagatttttattacaatatgactttcattagctacagactgtatt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2916 tgtgaatacttttataagatttttattacaatatgactttcattagctacagactgtatt 2857
Query: 723 gatatattt 731
|||||||||
Sbjct: 2856 gatatattt 2848
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5839
Number of Sequences: 1807
Number of extensions: 5839
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 733
length of database: 10,358,551
effective HSP length: 16
effective length of query: 717
effective length of database: 10,329,639
effective search space: 7406351163
effective search space used: 7406351163
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)